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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53955023_53958152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53955023 - 53958152

Intron Length:

3130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

CTCTCCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

CTCTCCTCCACA

Flanking Amino Acid:

YEADTAEYFLRAVRASSIFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.4

62.9

43.4

Major BPS

0.47

1.2

61.1

45.5

Major PPT

77.6

0.62

0.7

71.8

26.3

Minor 5ss

36.4

-1.5

2.9

47.3

41.1

Minor BPS

53.9

0.12

67.11

45.4

Associated Gene:

Gene:

CACNG2

Ensembl Gene ID:

ENSAPLG00000002618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002644

53912414 - 53959146

46733