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Intron Name: Anas_platyrhynchos_platyrhynchos_1_53958294_53958610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53958294 - 53958610

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGA

5'SS Class:

major

3'SS Sequence:

GCCTCTCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TCCTCCTGACGG

Flanking Amino Acid:

LSAGIFFVSAGLSNIIGIIV

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

42.4

Major BPS

68.9

0.47

59.2

39.1

Major PPT

75.3

0.57

0.8

72.3

32.3

Minor 5ss

34.1

-1.8

3.6

47.1

48.3

Minor BPS

45.9

-0.4

2.1

51.42

48.7

Associated Gene:

Gene:

CACNG2

Ensembl Gene ID:

ENSAPLG00000002618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002644

53912414 - 53959146

46733