Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_54049896_54050465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54049896 - 54050465

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AGTTTATTGACA

Flanking Amino Acid:

DFCIIHYAGKVDYKADEWLM

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.81

0.8

81.3

30.3

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

60.6

0.33

1.6

70.36

34.9

Associated Gene:

Gene:

MYH9

Ensembl Gene ID:

ENSAPLG00000007279

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007642

54020969 - 54070735

49767