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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54080171_54110058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54080171 - 54110058

Intron Length:

29888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

CTACATTCAATC

Flanking Amino Acid:

EAEAEGGGMQNEPLTSGYHG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

70.6

0.51

73.3

31.3

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

32.2

-2

40.4

45.3

Minor BPS

46.6

-0.2

1.7

53.86

37.9

Associated Gene:

Gene:

RBFOX2

Ensembl Gene ID:

ENSAPLG00000007609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042647

54079988 - 54225773

145786

ENSAPLT00000017261

54079988 - 54225773

145786

ENSAPLT00000007911

54079988 - 54226818

146831