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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54211395_54219542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54211395 - 54219542

Intron Length:

8148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAACT

Flanking Amino Acid:

VPPTAIPAYPGIVLQEPIIS

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.3

40.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.1

0.63

0.9

72.7

37.6

Minor 5ss

41.6

-0.9

2.9

45.2

Minor BPS

77.1

0.93

1.3

92.31

29.7

Associated Gene:

Gene:

RBFOX2

Ensembl Gene ID:

ENSAPLG00000007609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039746

54160935 - 54225773

64839

ENSAPLT00000027919

54152773 - 54225773

73001