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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54219586_54224463_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54219586 - 54224463

Intron Length:

4878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

GTATCTGTAAAG

Flanking Amino Acid:

EPIISAKIPQGGYAAYRYAQ

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

86.1

0.81

0.7

81.1

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

48.7

-0.2

2.1

58.21

43.2

Associated Gene:

Gene:

RBFOX2

Ensembl Gene ID:

ENSAPLG00000007609

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039746

54160935 - 54225773

64839

ENSAPLT00000027919

54152773 - 54225773

73001