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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54335014_54335152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54335014 - 54335152

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCCCTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

CTTCCTGGCAGT

Flanking Amino Acid:

KLKKLISFCRTKCGPRLSAA

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

69.3

35.8

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

81.9

0.72

0.7

76.6

25.5

Minor 5ss

29.9

-2.3

3.1

35.2

33.9

Minor BPS

36.8

-0.9

2.5

57.32

45.7

Associated Gene:

Gene:

MCM5

Ensembl Gene ID:

ENSAPLG00000007931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008297

54334045 - 54342393

8349