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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54335652_54336314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54335652 - 54336314

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

GTGACCTTGACC

Flanking Amino Acid:

MEQQTISIAKAGITTTLNSR

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

86.8

0.83

0.7

81.5

23.5

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

69.4

0.59

1.3

71.59

39.7

Associated Gene:

Gene:

MCM5

Ensembl Gene ID:

ENSAPLG00000007931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008297

54334045 - 54342393

8349