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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54336381_54336493_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54336381 - 54336493

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGTGG

5'SS Class:

major

3'SS Sequence:

CTTGCGTGAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

TTCCCCCCACCT

Flanking Amino Acid:

GVVCIDEFDKMREDDRVAIH

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

61.3

45.8

Major BPS

73.5

0.58

73.6

32.5

Major PPT

51.4

0.03

1.2

52.9

40.7

Minor 5ss

41.7

-0.9

3.2

55.9

48.3

Minor BPS

46.5

-0.1

2.1

70.64

45.7

Associated Gene:

Gene:

MCM5

Ensembl Gene ID:

ENSAPLG00000007931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008297

54334045 - 54342393

8349