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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54336638_54337384_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54336638 - 54337384

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTGAT

5'SS Class:

major

3'SS Sequence:

CCCACACACCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TCGTCCCACACA

Flanking Amino Acid:

KFVEKCSPIGVYTSGKGSSA

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

72.3

39.5

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

0.16

0.9

46.7

34.5

Minor 5ss

32.5

-2

3.5

39.8

46.2

Minor BPS

44.8

-0.4

2.3

59.33

46.5

Associated Gene:

Gene:

MCM5

Ensembl Gene ID:

ENSAPLG00000007931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008297

54334045 - 54342393

8349