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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54341403_54341488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54341403 - 54341488

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGTTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ACCCTCCTAATA

Flanking Amino Acid:

YKQPAEHLQLLEEAAKEVAD

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

75.2

40.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

73.2

0.52

0.9

65.3

41.1

Minor 5ss

-1.6

3.3

45.6

43.8

Minor BPS

48.6

-0.1

1.6

55.12

38.1

Associated Gene:

Gene:

MCM5

Ensembl Gene ID:

ENSAPLG00000007931

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008297

54334045 - 54342393

8349