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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54349601_54349892_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54349601 - 54349892

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

ACAGCTCTGATG

Flanking Amino Acid:

METSQKHGSESMSQDLSELL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

0.72

38.9

Major PPT

80.1

0.68

0.8

72.8

37.5

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

43.1

-0.6

1.7

41.23

37.7

Associated Gene:

Gene:

HMOX1

Ensembl Gene ID:

ENSAPLG00000008265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008590

54344265 - 54349924

5660