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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54367406_54368430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54367406 - 54368430

Intron Length:

1025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAA

U12 Branch Point Sequence:

GAGTAGTTAACG

Flanking Amino Acid:

EAPITPTPEQVGKLRSELEV

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.3

32.5

Major BPS

64.3

0.36

1.2

55.7

41.6

Major PPT

81.5

0.71

0.7

76.1

25.9

Minor 5ss

35.1

-1.7

2.8

43.9

Minor BPS

47.6

-0.3

2.3

54.48

45.9

Associated Gene:

Gene:

TOM1

Ensembl Gene ID:

ENSAPLG00000008336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008763

54358836 - 54378298

19463