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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54371263_54378246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54371263 - 54378246

Intron Length:

6984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGACCC

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAG

U12 Branch Point Sequence:

CCACTCTTAGCC

Flanking Amino Acid:

PFSSPVGQRIERATDGSLRN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

59.9

39.3

Major BPS

55.1

0.13

1.5

42.7

Major PPT

85.1

0.79

0.8

76.9

37.4

Minor 5ss

28.3

-2.5

36.1

40.2

Minor BPS

50.5

-0

1.6

56.02

42.4

Associated Gene:

Gene:

TOM1

Ensembl Gene ID:

ENSAPLG00000008336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008763

54358836 - 54378298

19463