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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54404389_54406015_R

Intron Information:

Intron Rank:

144138

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

54404389 - 54406015

Intron Length:

1627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCTGCAAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

CCTGCAAAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.11

48.3

37.4

Minor 5ss

40.4

-1.1

3.2

56.3

42.5

Minor BPS

41.8

-0.6

2.2

52.79

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032204

54403482 - 54412172

8691