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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54449726_54451665_R

Intron Information:

Intron Rank:

136529

Intron Class:

major

Intron Phase:

Intron Coordinates:

54449726 - 54451665

Intron Length:

1940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTACC

5'SS Class:

major

3'SS Sequence:

CATCTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

74.3

34.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

85.4

0.8

80.2

31.4

Minor 5ss

44.8

-0.6

2.4

55.6

35.3

Minor BPS

61.5

0.44

2.1

86.72

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022820

54448677 - 54451705

3029