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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54510859_54603505_R

Intron Information:

Intron Rank:

143471

Intron Class:

major

Intron Phase:

Intron Coordinates:

54510859 - 54603505

Intron Length:

92647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGCATA

5'SS Class:

major

3'SS Sequence:

TTTTTAATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

72.7

38.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.7

0.85

0.8

82.6

32.6

Minor 5ss

45.5

-0.5

2.9

63.6

Minor BPS

77.9

0.95

1.1

86.64

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035806

54509930 - 54603669

93740