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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54537378_54574224_F

Intron Information:

Intron Rank:

145849

Intron Class:

major

Intron Phase:

Intron Coordinates:

54537378 - 54574224

Intron Length:

36847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TTTTTTTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

91.4

0.93

0.6

87.9

22.3

Minor 5ss

40.8

-1

3.2

56.1

Minor BPS

55.3

0.16

74.67

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048308

54537343 - 54598150

60808