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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54574855_54595514_F

Intron Information:

Intron Rank:

145847

Intron Class:

major

Intron Phase:

Intron Coordinates:

54574855 - 54595514

Intron Length:

20660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAGCT

5'SS Class:

major

3'SS Sequence:

CTCTTACATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

GCTCTCTTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

73.7

35.1

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

64.2

0.32

1.1

64.9

34.7

Minor 5ss

29.4

-2.4

3.2

40.4

45.3

Minor BPS

50.4

0.09

1.7

66.95

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020441

54574225 - 54598150

23926