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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54595827_54597197_F

Intron Information:

Intron Rank:

145848

Intron Class:

major

Intron Phase:

Intron Coordinates:

54595827 - 54597197

Intron Length:

1371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

TGTTTGTTAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.6

34.9

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

83.6

0.76

0.8

76.8

37.4

Minor 5ss

36.6

-1.5

2.9

46.4

44.2

Minor BPS

52.7

0.06

2.3

70.25

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020441

54574225 - 54598150

23926