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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54680587_54683902_F

Intron Information:

Intron Rank:

143934

Intron Class:

major

Intron Phase:

Intron Coordinates:

54680587 - 54683902

Intron Length:

3316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGGTGA

5'SS Class:

major

3'SS Sequence:

TCTCTCTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAG

U12 Branch Point Sequence:

TCTCTCTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

62.1

39.1

Major BPS

55.9

0.15

1.5

39.8

Major PPT

80.6

0.69

0.8

76.8

30.4

Minor 5ss

43.9

-0.7

3.1

54.7

47.6

Minor BPS

77.8

0.87

1.1

80.35

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046387

54680018 - 54687412

7395