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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5477709_5480159_R

Intron Information:

Intron Rank:

155229

Intron Class:

major

Intron Phase:

Intron Coordinates:

5477709 - 5480159

Intron Length:

2451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

TTCTCCTTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.3

74.1

38.4

Major BPS

68.9

0.47

59.6

38.6

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

-2.2

2.6

32.5

Minor BPS

75.2

0.77

1.6

82.24

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042085

5477593 - 5482385

4793