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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5480365_5481745_R

Intron Information:

Intron Rank:

155230

Intron Class:

major

Intron Phase:

Intron Coordinates:

5480365 - 5481745

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTAGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTCCCCTAGAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

67.2

0.39

69.3

30.1

Minor 5ss

-1.4

3.1

50.1

46.4

Minor BPS

50.8

0.02

71.61

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042085

5477593 - 5482385

4793