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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54843301_54844038_F

Intron Information:

Intron Rank:

133093

Intron Class:

major

Intron Phase:

Intron Coordinates:

54843301 - 54844038

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.3

0.79

0.8

30.6

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

71.7

0.68

1.3

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044163

54842613 - 54849070

6458

ENSAPLT00000022412

54842613 - 54871751

29139