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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54844786_54848143_F

Intron Information:

Intron Rank:

133095

Intron Class:

major

Intron Phase:

Intron Coordinates:

54844786 - 54848143

Intron Length:

3358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGACTTTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

GTCTGCTGACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

82.6

29.4

Major BPS

62.6

0.31

59.1

37.6

Major PPT

78.8

0.65

0.9

72.7

37.4

Minor 5ss

35.4

-1.7

2.9

48.5

40.3

Minor BPS

46.2

-0.2

2.1

65.07

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032235

54844550 - 54849070

4521