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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54905123_54984244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

54905123 - 54984244

Intron Length:

79122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTTCT

5'SS Class:

major

3'SS Sequence:

CTCTACTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTCTCCTCTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

74.1

37.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

83.3

0.75

0.8

80.3

31.3

Minor 5ss

41.6

-0.9

3.1

55.7

43.9

Minor BPS

65.2

0.56

1.9

84.71

41.7

Associated Gene:

Gene:

LARGE1

Ensembl Gene ID:

ENSAPLG00000008894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024425

54905046 - 55181790

276745

ENSAPLT00000009291

54905046 - 55182358

277313