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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5494242_5504436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5494242 - 5504436

Intron Length:

10195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTGTTATTACT

Flanking Amino Acid:

KRAKLDLPVAGKEDEFPKKP

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

73.9

30.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.8

0.74

0.7

81.5

30.5

Minor 5ss

38.4

-1.3

3.1

47.6

42.6

Minor BPS

49.2

0.02

76.04

40.8

Associated Gene:

Gene:

USP6NL

Ensembl Gene ID:

ENSAPLG00000010144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039025

5493085 - 5604274

111190

ENSAPLT00000010615

5493085 - 5604212

111128

ENSAPLT00000046862

5493085 - 5559299

66215