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Intron Name: Anas_platyrhynchos_platyrhynchos_1_54984432_55037125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54984432 - 55037125

Intron Length:

52694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TATATTCTGACA

Flanking Amino Acid:

WIYLFAGSFEDGKPVSLSPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

78.2

0.63

0.7

72.8

25.4

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

49.6

-0

1.6

64.16

35.7

Associated Gene:

Gene:

LARGE1

Ensembl Gene ID:

ENSAPLG00000008894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024756

54922195 - 55181770

259576

ENSAPLT00000024425

54905046 - 55181790

276745

ENSAPLT00000009291

54905046 - 55182358

277313