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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55002817_55037125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55002817 - 55037125

Intron Length:

34309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TATATTCTGACA

Flanking Amino Acid:

SFPYLLVVIQDGKPVSLSPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

78.2

0.63

0.7

72.8

25.4

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

49.6

-0

1.6

64.16

35.7

Associated Gene:

Gene:

LARGE1

Ensembl Gene ID:

ENSAPLG00000008894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022382

55002765 - 55181770

179006