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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55055413_55076165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55055413 - 55076165

Intron Length:

20753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGACA

5'SS Class:

strong_major

3'SS Sequence:

CATTTCCTGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCTTTCCCACTT

Flanking Amino Acid:

IDFYDADELKSEVSWIPNKH

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.7

35.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

70.5

0.46

0.9

70.3

Minor 5ss

31.9

-2.1

3.1

40.7

45.3

Minor BPS

45.9

-0.2

2.1

43.5

Associated Gene:

Gene:

LARGE1

Ensembl Gene ID:

ENSAPLG00000008894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022382

55002765 - 55181770

179006

ENSAPLT00000009291

54905046 - 55182358

277313

ENSAPLT00000024756

54922195 - 55181770

259576

ENSAPLT00000024425

54905046 - 55181790

276745