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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5508212_5513017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5508212 - 5513017

Intron Length:

4806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGGAGT

5'SS Class:

major

3'SS Sequence:

ATTCTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

GGTACATAAACC

Flanking Amino Acid:

LLSGPKHAMHGFFIPGFPKL

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

66.3

44.7

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

83.5

0.75

0.7

29.2

Minor 5ss

33.1

-1.9

3.4

45.6

44.5

Minor BPS

-0

62.39

42.2

Associated Gene:

Gene:

USP6NL

Ensembl Gene ID:

ENSAPLG00000010144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039025

5493085 - 5604274

111190

ENSAPLT00000010615

5493085 - 5604212

111128

ENSAPLT00000046862

5493085 - 5559299

66215