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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5513139_5514978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5513139 - 5514978

Intron Length:

1840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTAATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATTTTCTAATT

Flanking Amino Acid:

VLAAYSIYNTEVGYCQGMSQ

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

79.1

37.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.1

0.77

0.8

81.3

Minor 5ss

42.4

-0.8

2.9

59.1

45.4

Minor BPS

57.2

0.3

1.6

72.85

38.7

Associated Gene:

Gene:

USP6NL

Ensembl Gene ID:

ENSAPLG00000010144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039025

5493085 - 5604274

111190

ENSAPLT00000010615

5493085 - 5604212

111128

ENSAPLT00000046862

5493085 - 5559299

66215