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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55138286_55148029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55138286 - 55148029

Intron Length:

9744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTCTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTTTTTTTCCCT

Flanking Amino Acid:

QCYRDVSDLKVIHWNSPKKL

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

64.7

0.33

1.7

77.5

31.2

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

42.5

-0.4

3.6

74.22

43.6

Associated Gene:

Gene:

LARGE1

Ensembl Gene ID:

ENSAPLG00000008894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024425

54905046 - 55181790

276745

ENSAPLT00000022382

55002765 - 55181770

179006

ENSAPLT00000009291

54905046 - 55182358

277313

ENSAPLT00000024756

54922195 - 55181770

259576