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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55171808_55176897_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55171808 - 55176897

Intron Length:

5090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGAA

5'SS Class:

major

3'SS Sequence:

ATGTCTGTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTCTGTTGAAG

Flanking Amino Acid:

MLDMGTLFTFRYHVWTKGHA

Intron Amino Acid Position:

626

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.2

34.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

64.4

0.32

1.2

64.2

41.2

Minor 5ss

28.6

-2.5

3.5

37.7

47.1

Minor BPS

44.7

-0.5

2.2

53.47

41.3

Associated Gene:

Gene:

LARGE1

Ensembl Gene ID:

ENSAPLG00000008894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022382

55002765 - 55181770

179006

ENSAPLT00000009291

54905046 - 55182358

277313

ENSAPLT00000024756

54922195 - 55181770

259576

ENSAPLT00000024425

54905046 - 55181790

276745