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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5520487_5529052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5520487 - 5529052

Intron Length:

8566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

SWEKYKNSEKFHRRIYKGIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.1

32.2

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

39.7

-1.2

3.4

55.3

48.9

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

USP6NL

Ensembl Gene ID:

ENSAPLG00000010144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039025

5493085 - 5604274

111190

ENSAPLT00000010615

5493085 - 5604212

111128

ENSAPLT00000046862

5493085 - 5559299

66215