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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55282804_55294811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55282804 - 55294811

Intron Length:

12008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAC

U12 Branch Point Sequence:

CTGTCCTTGAGT

Flanking Amino Acid:

NGEFDIRVEQAEFSELNLAA

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

34.3

Major BPS

49.6

-0

1.3

53.3

40.4

Major PPT

72.9

0.51

0.9

38.3

Minor 5ss

28.4

-2.5

34.8

41.6

Minor BPS

66.7

0.61

1.7

78.7

44.1

Associated Gene:

Gene:

SYN3

Ensembl Gene ID:

ENSAPLG00000010781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011240

55249299 - 55436457

187159