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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55308209_55314306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55308209 - 55314306

Intron Length:

6098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TATCTGCCCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCTAT

U12 Branch Point Sequence:

TCTCCTTCTATC

Flanking Amino Acid:

IYNFCSKPWVFSQLIKIFNS

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

61.5

0.29

1.3

62.1

44.1

Major PPT

60.2

0.23

1.1

38.7

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

47.8

-0.1

1.8

59.89

39.7

Associated Gene:

Gene:

SYN3

Ensembl Gene ID:

ENSAPLG00000010781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011240

55249299 - 55436457

187159