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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55322986_55329614_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55322986 - 55329614

Intron Length:

6629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GATGACTTAAAG

Flanking Amino Acid:

TMRYTVKQMKMYRGFQIMPH

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.4

0.71

0.8

74.3

35.9

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

50.3

-0.1

1.8

56.09

44.3

Associated Gene:

Gene:

TIMP3

Ensembl Gene ID:

ENSAPLG00000023484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037987

55319905 - 55399548

79644