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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5533574_5550871_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5533574 - 5550871

Intron Length:

17298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

TCTTTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TTTTTGTAGATT

Flanking Amino Acid:

YKVTDRFGFLHPEELPVHDA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

39.5

Major BPS

0.6

1.2

75.9

36.3

Major PPT

89.8

0.89

0.7

87.9

29.4

Minor 5ss

37.3

-1.4

2.8

48.1

41.6

Minor BPS

48.9

-0

2.3

77.73

39.7

Associated Gene:

Gene:

USP6NL

Ensembl Gene ID:

ENSAPLG00000010144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046862

5493085 - 5559299

66215

ENSAPLT00000010615

5493085 - 5604212

111128