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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55353851_55398788_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55353851 - 55398788

Intron Length:

44938

Sequence Information:

Terminal Dinucleotides:

GC-TT

5'SS Sequence:

GCA|GCGAGCAGC

5'SS Class:

weak_major

3'SS Sequence:

CGTGCATCGCCTT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGTGCAT

U12 Branch Point Sequence:

CGTGCAGCACCC

Flanking Amino Acid:

MLQLQQRAAPVHRLAPLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.4

Major BPS

-0

1.5

60.7

45.9

Major PPT

18.6

-1.8

35.6

40.5

Minor 5ss

26.2

-2.7

3.8

39.6

40.2

Minor BPS

34.3

-1.2

2.3

43.7

Associated Gene:

Gene:

TIMP3

Ensembl Gene ID:

ENSAPLG00000023484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037987

55319905 - 55399548

79644