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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55406068_55416805_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55406068 - 55416805

Intron Length:

10738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGGCAATCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTTTGCTGTATT

Flanking Amino Acid:

LGHAHAGMGKVKVENQHDFR

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

58.1

0.18

1.2

54.6

44.2

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

52.1

0.15

2.2

80.68

41.2

Associated Gene:

Gene:

SYN3

Ensembl Gene ID:

ENSAPLG00000010781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011240

55249299 - 55436457

187159