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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55420939_55424365_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55420939 - 55424365

Intron Length:

3427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGGTTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

AGACACTTAATC

Flanking Amino Acid:

AMLEQIAMTERYRLWADACA

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

78.2

0.7

77.9

32.1

Major PPT

78.7

0.65

0.9

37.4

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

57.1

0.2

1.5

61.61

36.8

Associated Gene:

Gene:

SYN3

Ensembl Gene ID:

ENSAPLG00000010781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011240

55249299 - 55436457

187159