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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55430037_55434146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55430037 - 55434146

Intron Length:

4110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTAACTGGAATA

Flanking Amino Acid:

GSTPSPLRPWPPQVQPQSVK

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

62.5

43.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

0.92

0.6

85.6

29.2

Minor 5ss

30.9

-2.2

31.2

42.3

Minor BPS

46.6

-0.2

2.1

61.66

38.7

Associated Gene:

Gene:

SYN3

Ensembl Gene ID:

ENSAPLG00000010781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011240

55249299 - 55436457

187159