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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55435338_55436218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55435338 - 55436218

Intron Length:

881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TTTTCCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCAGTGTCAACT

Flanking Amino Acid:

KQQANPHPHLNKSQSLTNTF

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

72.8

35.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

88.3

0.86

0.7

86.1

26.6

Minor 5ss

35.6

-1.6

3.5

49.9

40.8

Minor BPS

45.4

-0.2

2.3

64.08

46.3

Associated Gene:

Gene:

SYN3

Ensembl Gene ID:

ENSAPLG00000010781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011240

55249299 - 55436457

187159