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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55489228_55489879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55489228 - 55489879

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

ACCATCTTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTCTTTATCT

Flanking Amino Acid:

LISEDLQSLNVLMPIDDLAE

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

73.7

31.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

75.7

0.58

0.9

68.2

36.8

Minor 5ss

36.2

-1.6

2.8

41.9

38.9

Minor BPS

80.3

1.03

1.4

95.73

30.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010557

55483963 - 55498508

14546