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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55497048_55497811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55497048 - 55497811

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCTA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CATCCCTAAATC

Flanking Amino Acid:

LQTEVIPSANAKLSKGFPLP

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.4

40.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

74.9

0.56

79.2

33.2

Minor 5ss

34.5

-1.8

3.4

44.3

44.6

Minor BPS

57.9

0.23

1.7

64.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010557

55483963 - 55498508

14546