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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55502722_55503592_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55502722 - 55503592

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

CCTACTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

ACTCCCTTGATT

Flanking Amino Acid:

MNDPEAVVSPGGVGFDINCG

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

71.5

0.53

1.1

43.2

Major PPT

74.2

0.54

0.8

65.5

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

71.1

0.74

1.2

78.82

37.5

Associated Gene:

Gene:

RTCB

Ensembl Gene ID:

ENSAPLG00000008226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008538

55499275 - 55510326

11052