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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55503750_55504360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55503750 - 55504360

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGAGAA

5'SS Class:

major

3'SS Sequence:

TTGGTACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TGTTTGGTACCT

Flanking Amino Acid:

GSKGVIPMNAKDLEEALEMG

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

0.9

70.2

28.6

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

74.2

0.54

0.9

67.1

39.4

Minor 5ss

-2.8

3.2

29.4

37.2

Minor BPS

43.6

-0.4

2.7

71.56

45.6

Associated Gene:

Gene:

RTCB

Ensembl Gene ID:

ENSAPLG00000008226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008538

55499275 - 55510326

11052