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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55504518_55505628_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55504518 - 55505628

Intron Length:

1111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCCA

5'SS Class:

major

3'SS Sequence:

TTGTGATTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTGTTGTGATT

Flanking Amino Acid:

SRAKKRGLPQLGTLGAGNHY

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

65.1

40.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

70.2

0.46

1.1

66.1

44.4

Minor 5ss

31.1

-2.2

3.2

40.1

45.4

Minor BPS

46.1

-0.2

39.8

Associated Gene:

Gene:

RTCB

Ensembl Gene ID:

ENSAPLG00000008226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008538

55499275 - 55510326

11052