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Intron Name: Anas_platyrhynchos_platyrhynchos_1_55507763_55508007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55507763 - 55508007

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCATCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATCCACA

Flanking Amino Acid:

HHPLIAVDYQLTGQPVLIGG

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

86.9

22.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

0.59

0.9

69.5

35.8

Minor 5ss

45.5

-0.5

2.8

58.5

40.4

Minor BPS

47.1

-0.2

2.3

68.77

43.4

Associated Gene:

Gene:

RTCB

Ensembl Gene ID:

ENSAPLG00000008226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008538

55499275 - 55510326

11052